Gb_40630 (HTA6)

Aliases : HTA6

Description : histone (H2A)

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_40630

Target	Alias	Description	ECC score	Gene Family Method
Aev_g08544	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g23857	HTA7	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05288	HTA6	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15481	RAT5, HTA1, ATHTA1	histone *(H2A) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g03984	HTA7	histone *(H2A) & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g39892	HTA10	histone *(H2A) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	101	133
IPR007125	Histone_H2A/H2B/H3	20	98

External Links

No external refs found!