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  5. Gb_40540

Gb_40540 (SSP5)


Aliases : SSP5

Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40540

Target Alias Description ECC score Gene Family Method Actions
AT5G46410 SSP4 SCP1-like small phosphatase 4 0.02 OrthoFinder output from all 47 species
Aop_g18358 SSP5 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000178.74 SSP5 No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g47540.1 SSP4, LOC_Os01g47540 RNA polymerase-II phosphatase. subcluster B phosphatase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018354 SSP5 subcluster B phosphatase & original description: CDS=45-1544 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 211 371
No external refs found!