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Gb_40389


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana (sp|q9c7a2|itn1_arath : 138.0)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40389
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AT4G03480 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001639001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01013543001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01018107001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26484 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09530.1 LOC_Os07g09530 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os09g16240.1 LOC_Os09g16240 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g09190.1 LOC_Os11g09190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g061740.4.1 Solyc07g061740 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Solyc07g061750.4.1 Solyc07g061750 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc07g061760.3.1 Solyc07g061760 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Zm00001e031178_P002 Zm00001e031178 Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 390 417
IPR002110 Ankyrin_rpt 137 167
IPR020683 DUF3447 17 113
IPR020683 DUF3447 230 314
IPR026961 PGG_dom 479 583
No external refs found!