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  5. Gb_40179

Gb_40179 (NFU2, ATCNFU2)


Aliases : NFU2, ATCNFU2

Description : scaffold protein NFU of plastidial SUF system transfer phase


Gene families : OG0003751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40179
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236430 ATCNFU3, NFU3,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
Als_g09300 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.05 OrthoFinder output from all 47 species
Aop_g64817 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.05 OrthoFinder output from all 47 species
Dac_g09332 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Dcu_g05186 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.03 OrthoFinder output from all 47 species
Dde_g48924 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.03 OrthoFinder output from all 47 species
Ehy_g27738 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.06 OrthoFinder output from all 47 species
LOC_Os06g47940.1 ATCNFU3, NFU3,... scaffold protein NFU of plastidial SUF system transfer phase 0.04 OrthoFinder output from all 47 species
Nbi_g08868 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Ore_g08081 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Pir_g11640 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Ppi_g52825 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.03 OrthoFinder output from all 47 species
Sam_g15028 No alias scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Sam_g24035 No alias scaffold protein NFU of plastidial SUF system transfer... 0.05 OrthoFinder output from all 47 species
Solyc01g103710.4.1 NFU2, ATCNFU2,... scaffold protein NFU of plastidial SUF system transfer phase 0.02 OrthoFinder output from all 47 species
Solyc05g044630.3.1 ATCNFU3, NFU3,... scaffold protein NFU of plastidial SUF system transfer phase 0.03 OrthoFinder output from all 47 species
Spa_g23033 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Tin_g16769 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Zm00001e024544_P001 NFU2, ATCNFU2,... scaffold protein NFU of plastidial SUF system transfer phase 0.02 OrthoFinder output from all 47 species
Zm00001e030263_P002 ATCNFU3, NFU3,... scaffold protein NFU of plastidial SUF system transfer phase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 187 249
IPR001075 NIF_FeS_clus_asmbl_NifU_C 106 171
No external refs found!