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Gb_40110


Description : Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana (sp|q8vyr5|pp351_arath : 310.0)


Gene families : OG0005110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40110

Target Alias Description ECC score Gene Family Method Actions
AT4G35850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g01276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032367001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.04 OrthoFinder output from all 47 species
LOC_Os05g05320.1 LOC_Os05g05320 Pentatricopeptide repeat-containing protein At4g35850,... 0.07 OrthoFinder output from all 47 species
MA_10434276g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 OrthoFinder output from all 47 species
Mp7g04570.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 OrthoFinder output from all 47 species
Nbi_g00854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g112020.3.1 Solyc01g112020 Pentatricopeptide repeat-containing protein At4g35850,... 0.02 OrthoFinder output from all 47 species
Zm00001e027516_P001 Zm00001e027516 Pentatricopeptide repeat-containing protein At4g35850,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 56
No external refs found!