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  5. Gb_40009

Gb_40009


Description : TNO1 vesicle trafficking tethering factor


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40009

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00185400 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.1 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g30311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene59720.t1 Aspi01Gene59720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G031700.1 Ceric.15G031700 not classified & original description: pacid=50639891... 0.03 OrthoFinder output from all 47 species
Ehy_g01716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.08 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Len_g22993 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10431592g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_156987g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_4333439g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Ore_g38228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022514 No alias not classified & original description: CDS=346-8904 0.02 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.02 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g46270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!