LOC_Os03g16824 (Os03g0275900)


Aliases : Os03g0275900

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. plant U-box 13 (PUB13)


Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g16824
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G71020 No alias ARM repeat superfamily protein 0.05 Gene family
LOC_Os06g01304 Os06g0102700,... 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g007640.3.1 Solyc04g007640.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.03 Gene family
Solyc11g008390.2.1 Solyc11g008390.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 502 540
IPR000225 Armadillo 419 458
IPR003613 Ubox_domain 294 364
No external refs found!