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  5. Gb_39925

Gb_39925 (AtRCD1, RCD1, ATP8, CEO1, CEO)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO

Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana (sp|q8ry59|rcd1_arath : 174.0)


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39925
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00059840 AtRCD1, RCD1,... Probable inactive poly [ADP-ribose] polymerase SRO1... 0.03 OrthoFinder output from all 47 species
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.03 OrthoFinder output from all 47 species
Cba_g08763 SRO1 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g27125 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g29371 No alias organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e002482_P002 SRO1, Zm00001e002482 Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Zm00001e023927_P003 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004170 WWE-dom 122 176
IPR022003 RST 615 679
IPR012317 Poly(ADP-ribose)pol_cat_dom 406 509
No external refs found!