1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_39869

Gb_39869 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel (SLAC)


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39869
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00198820 RCD3, CDI3,... Solute transport.channels.SLAC anion channel 0.03 OrthoFinder output from all 47 species
AT1G62262 SLAH4 SLAC1 homologue 4 0.03 OrthoFinder output from all 47 species
Als_g19840 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17537 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63456.t1 RCD3, CDI3,... anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1105.g097655 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=80-1609 0.03 OrthoFinder output from all 47 species
Dde_g02912 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18127 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019915001 RCD3, CDI3, SLAC1, OZS1 Solute transport.channels.SLAC anion channel 0.07 OrthoFinder output from all 47 species
LOC_Os01g14520.1 SLAH1, LOC_Os01g14520 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os01g43460.2 SLAH3, LOC_Os01g43460 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
MA_175194g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Msp_g24130 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25171 No alias anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38748 No alias anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g079770.3.1 RCD3, CDI3,... anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
Spa_g47869 SLAH3 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20239 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39847 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007191_P002 RCD3, CDI3,... anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e027903_P001 SLAH2, Zm00001e027903 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 377 680
No external refs found!