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  5. Gb_39800

Gb_39800


Description : F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana (sp|q8rwu5|fbl3_arath : 610.0)


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39800
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Ehy_g01378 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01030257001 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g39675 EBF2 substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 15 53
IPR001611 Leu-rich_rpt 325 347
IPR001611 Leu-rich_rpt 173 195
IPR001611 Leu-rich_rpt 403 425
IPR001611 Leu-rich_rpt 427 449
IPR001611 Leu-rich_rpt 350 374
IPR001611 Leu-rich_rpt 505 527
IPR001611 Leu-rich_rpt 555 578
No external refs found!