LOC_Os03g16480 (Os03g0271600)


Aliases : Os03g0271600

Description : No description available


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g16480
Cluster HCCA cluster: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
AT1G26800 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G44330 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G02340 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G13430 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Gene family
AT3G51325 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G01980 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.07 Gene family
GSVIVT01015309001 No alias No description available 0.03 Gene family
GSVIVT01016510001 No alias No description available 0.04 Gene family
GSVIVT01024920001 No alias No description available 0.06 Gene family
LOC_Os01g74040 Os01g0972000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g20870 Os03g0324900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g016410.3.1 Solyc01g016410.3 No description available 0.04 Gene family
Solyc01g104260.3.1 Solyc01g104260.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc02g065650.1.1 Solyc02g065650.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g114680.3.1 Solyc03g114680.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc05g018050.1.1 Solyc05g018050.1 No description available 0.03 Gene family
Solyc08g067290.3.1 Solyc08g067290.3 17.1.2 hormone metabolism.abscisic acid.signal... 0.03 Gene family
Solyc12g008440.1.1 Solyc12g008440.1 No description available 0.05 Gene family
Solyc12g008473.1.1 Solyc12g008473.1 No description available 0.03 Gene family
Zm00001d011076 GRMZM2G364612 No description available 0.05 Gene family
Zm00001d012564 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d018393 GRMZM2G467756 No description available 0.02 Gene family
Zm00001d031273 GRMZM2G169449 31.1 cell.organisation Encodes a RING-H2 protein that... 0.04 Gene family
Zm00001d031741 GRMZM2G049346 No description available 0.04 Gene family
Zm00001d035677 GRMZM2G567897 No description available 0.04 Gene family
Zm00001d040445 GRMZM2G305264 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATCRT1 0.02 Gene family
Zm00001d047560 GRMZM2G027120 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATCRT1 0.06 Gene family
Zm00001d051736 GRMZM2G122848 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 7 36
IPR001841 Znf_RING 134 176
IPR010543 DUF1117 192 277
No external refs found!