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  5. Gb_39699

Gb_39699


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 511.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39699
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Gb_11664 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_21016 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_31111 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 302
IPR002885 Pentatricopeptide_repeat 47 73
IPR002885 Pentatricopeptide_repeat 218 244
IPR002885 Pentatricopeptide_repeat 583 607
IPR002885 Pentatricopeptide_repeat 246 275
IPR002885 Pentatricopeptide_repeat 305 352
IPR002885 Pentatricopeptide_repeat 508 556
IPR002885 Pentatricopeptide_repeat 407 454
IPR002885 Pentatricopeptide_repeat 143 191
No external refs found!