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  5. Gb_39427

Gb_39427


Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39427
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Ala_g07945 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g21761 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g30721 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.07 OrthoFinder output from all 47 species
Cba_g53669 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g29452 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01034729001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Gb_39426 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
LOC_Os01g63854.1 LOC_Os01g63854 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
LOC_Os05g50920.1 LOC_Os05g50920 gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Len_g03277 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Len_g13839 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Len_g14644 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g10775 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g13108 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
MA_5252194g0010 No alias Probable GABA transporter 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g14240.1 No alias gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Nbi_g04812 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Pir_g58528 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g25018 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g06414 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g28801 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g17756 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e019226_P001 Zm00001e019226 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Zm00001e020438_P001 Zm00001e020438 gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 36 405
No external refs found!