Gb_39186


Description : Protein G1-like6 OS=Oryza sativa subsp. indica (sp|a2xav5|g1l6_orysi : 219.0)


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39186
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00052610 LSH6,... Protein G1-like2 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.03 OrthoFinder output from all 47 species
AMTR_s00155p00022580 LSH6,... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.06 OrthoFinder output from all 47 species
Adi_g018931 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g06922 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g08698 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g27588 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0639.g080525 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g31587 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15328 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g05446 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g16892 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g11211 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020708001 LSH10 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 OrthoFinder output from all 47 species
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.04 OrthoFinder output from all 47 species
LOC_Os02g07030.1 LSH4, LOC_Os02g07030 Protein G1-like1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g46030.1 LSH4, LOC_Os06g46030 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Len_g03807 LSH1 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g19988 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_12926g0010 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
MA_139833g0010 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
MA_211369g0010 LSH3 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
Msp_g25188 LSH6 plant-specific ALOG-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pir_g10661 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo36560 No alias Protein G1-like4 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
Solyc02g069510.1.1 LSH4, Solyc02g069510 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.01 OrthoFinder output from all 47 species
Solyc06g083860.2.1 LSH3, Solyc06g083860 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 OrthoFinder output from all 47 species
Solyc07g150147.1.1 LSH10, Solyc07g150147 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 OrthoFinder output from all 47 species
Solyc09g025280.1.1 LSH4, Solyc09g025280 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Spa_g04648 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g07735 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g18334 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g22798 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g28138 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e004570_P001 LSH4, Zm00001e004570 Protein G1-like4 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Zm00001e012687_P001 LSH4, Zm00001e012687 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
Zm00001e019403_P001 LSH6, Zm00001e019403 Protein G1-like7 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Zm00001e027222_P001 LSH6, Zm00001e027222 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 OrthoFinder output from all 47 species
Zm00001e030343_P002 LSH4, Zm00001e030343 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Zm00001e032784_P001 LSH6, Zm00001e032784 Protein G1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 34 152
No external refs found!