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  5. Gb_39147

Gb_39147 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : ent-copalyl diphosphate synthase


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39147

Target Alias Description ECC score Gene Family Method Actions
Dac_g21648 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29134 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30449 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06744 No alias mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.03 OrthoFinder output from all 47 species
Gb_10756 No alias Bifunctional levopimaradiene synthase, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_12468 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_15692 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.05 OrthoFinder output from all 47 species
Gb_17366 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_17941 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_39616 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g30800.1 KS, KS1, ATKS1,... Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_10435334g0020 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
MA_34273g0020 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.06 OrthoFinder output from all 47 species
Ore_g31705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34951 CPS, ATCPS1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36956 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08618 CPS, ATCPS1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63465 CPS, ATCPS1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006545.1.1 KS, KS1, ATKS1,... Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g005635.1.1 KS, KS1, ATKS1,... Beta-phellandrene synthase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 174 378
No external refs found!