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  5. Gb_38659

Gb_38659 (FLN1)


Aliases : FLN1

Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38659
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Adi_g024685 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Aob_g37574 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Azfi_s0098.g043926 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.04 OrthoFinder output from all 47 species
LOC_Os01g63220.2 FLN1, LOC_Os01g63220 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Len_g15047 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Tin_g07778 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.04 OrthoFinder output from all 47 species
Zm00001e019266_P002 FLN1, Zm00001e019266 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 316 487
No external refs found!