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Aliases : RPL23AB
Description : component RPL23a of LSU proteome component
Gene families : OG0001401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_38537 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00069970 | RPL23AB,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00132520 | RPL23AB,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| AT2G39460 | RPL23A, RPL23AA, ATRPL23A | ribosomal protein L23AA | 0.14 | OrthoFinder output from all 47 species | |
| AT3G55280 | RPL23AB | ribosomal protein L23AB | 0.13 | OrthoFinder output from all 47 species | |
| Adi_g005345 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g08733 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31538 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g25154 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12745 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g18428 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g19896 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g21462 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G093600.1 | RPL23AB, Ceric.12G093600 | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G096300.1 | RPL23AB, Ceric.14G096300 | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000037.39 | RPL23AB | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Cre06.g282500 | RPL23A, RPL23AA, ATRPL23A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g14569 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g34947 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g41671 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04260 | RPL23A, RPL23AA, ATRPL23A | component *(uL23) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025041001 | RPL23AB | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g24690.1 | RPL23AB, LOC_Os01g24690 | component RPL23a of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g42270.2 | RPL23AB, LOC_Os04g42270 | component RPL23a of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g18579 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430928g0010 | RPL23AB | component RPL23a of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| MA_10436962g0020 | RPL23A, RPL23AA, ATRPL23A | component RPL23a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g00570.1 | RPL23AB | component RPL23a of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g10039 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g35076 | RPL23A, RPL23AA, ATRPL23A | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10109 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16620 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06153 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_19360V3.1 | RPL23AB, Pp3c12_19360 | ribosomal protein L23AB | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c13_15920V3.1 | RPL23AB, Pp3c13_15920 | ribosomal protein L23AB | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_21160V3.1 | RPL23AB, Pp3c3_21160 | ribosomal protein L23AB | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c4_8620V3.1 | RPL23AB, Pp3c4_8620 | ribosomal protein L23AB | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g25916 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g52143 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g00769 | No alias | component *(uL23) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g06116 | No alias | component *(uL23) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g06117 | No alias | component *(uL23) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g22104 | No alias | component *(uL23) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo271663 | RPL23AB | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Solyc09g005720.3.1 | RPL23AB, Solyc09g005720 | component RPL23a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g084610.3.1 | RPL23AB, Solyc10g084610 | component RPL23a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g086330.2.1 | RPL23AB, Solyc10g086330 | component RPL23a of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g01808 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g10914 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g25289 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g45231 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03678 | RPL23AB | component *(uL23) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e007662_P001 | RPL23AB, Zm00001e007662 | component RPL23a of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e031062_P001 | RPL23A, RPL23AA,... | component RPL23a of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041164_P001 | RPL23A, RPL23AA,... | component RPL23a of LSU proteome component | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |