Gb_38097 (ARLA1C, ATARLA1C)

Aliases : ARLA1C, ATARLA1C

Description : small GTPase (ARL8)

Gene families : OG0002135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_38097

Target	Alias	Description	ECC score	Gene Family Method
Als_g06482	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g12159	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.29G006900.1	ARLA1A,...	small GTPase *(ARL8) & original description:...	0.04	OrthoFinder output from all 47 species
Cre17.g708250	ARLA1D, ATARLA1D	External stimuli response.biotic stress.tobamovirus...	0.01	OrthoFinder output from all 47 species
Dcu_g45680	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g49980.1	ARLA1A,...	small GTPase (ARL8)	0.04	OrthoFinder output from all 47 species
MA_14901g0010	ARLA1C, ATARLA1C	small GTPase (ARL8)	0.03	OrthoFinder output from all 47 species
Nbi_g15960	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	4	75
IPR006689	Small_GTPase_ARF/SAR	93	180

External Links

No external refs found!