Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 701.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G14730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007811001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01008757001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01010654001 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012206001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01015087001 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021774001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024915001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01027504001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028022001 | No alias | Pentatricopeptide repeat-containing protein At3g62890... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028154001 | No alias | Pentatricopeptide repeat-containing protein At2g35030,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01031265001 | LPA66 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031266001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01034655001 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036010001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036943001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00199 | OTP84 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
Gb_03512 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04428 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_07638 | OTP84 | Pentatricopeptide repeat-containing protein At4g21300... | 0.06 | OrthoFinder output from all 47 species | |
Gb_07756 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_17734 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
Gb_26861 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
Gb_38068 | OTP86 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g01115.1 | LOC_Os01g01115 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g40720.1 | LOC_Os01g40720 | RNA editing factor (MEF7) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g68490.1 | MEF21, LOC_Os01g68490 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g13230.1 | LOC_Os03g13230 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g60690.1 | LPA66, LOC_Os03g60690 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g63510.1 | LOC_Os03g63510 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g49185.1 | LOC_Os06g49185 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g15800.1 | LOC_Os09g15800 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g24640.1 | REME1, LOC_Os09g24640 | Pentatricopeptide repeat-containing protein At2g36730... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g01836.1 | LOC_Os11g01836 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g06650.1 | LOC_Os12g06650 | Pentatricopeptide repeat-containing protein At4g15720... | 0.05 | OrthoFinder output from all 47 species | |
MA_100606g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10426261g0020 | CRR22 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429540g0010 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.05 | OrthoFinder output from all 47 species | |
MA_10429958g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_10432670g0020 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10435641g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_1109g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.06 | OrthoFinder output from all 47 species | |
MA_11454g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
MA_118886g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
MA_124907g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_140591g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_14381g0010 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
MA_185098g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.1 | OrthoFinder output from all 47 species | |
MA_193080g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
MA_472579g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_481619g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_49292g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_59148g0010 | CRR22 | RNA editing factor (MEF11) | 0.04 | OrthoFinder output from all 47 species | |
MA_61422g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | OrthoFinder output from all 47 species | |
MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_68718g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_7379g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_8491g0010 | CRR2 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_95261g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g081560.2.1 | Solyc01g081560 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g005280.1.1 | Solyc02g005280 | Pentatricopeptide repeat-containing protein At1g50270... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g065560.1.1 | Solyc02g065560 | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g088650.1.1 | Solyc02g088650 | Pentatricopeptide repeat-containing protein At5g39350... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g093380.1.1 | Solyc02g093380 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g007840.1.1 | Solyc03g007840 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115790.1.1 | CRR28, Solyc03g115790 | Pentatricopeptide repeat-containing protein At5g66520... | 0.07 | OrthoFinder output from all 47 species | |
Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.06 | OrthoFinder output from all 47 species | |
Solyc04g009000.1.1 | Solyc04g009000 | RNA editing factor (SLO2) | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g076330.3.1 | CRR22, Solyc04g076330 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g062610.2.1 | Solyc06g062610 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g059575.1.1 | Solyc09g059575 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g075170.1.1 | Solyc09g075170 | Pentatricopeptide repeat-containing protein At3g62890... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g080220.2.1 | Solyc10g080220 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g006940.3.1 | Solyc11g006940 | component Sm-G of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g096510.3.1 | Solyc12g096510 | Pentatricopeptide repeat-containing protein At5g66520... | 0.05 | OrthoFinder output from all 47 species | |
Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e001200_P001 | Zm00001e001200 | Pentatricopeptide repeat-containing protein At5g59600... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011748_P001 | LPA66, Zm00001e011748 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e023800_P003 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032581_P001 | Zm00001e032581 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035817_P001 | Zm00001e035817 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 517 | 541 |
IPR032867 | DYW_dom | 616 | 740 |
IPR002885 | Pentatricopeptide_repeat | 241 | 287 |
IPR002885 | Pentatricopeptide_repeat | 341 | 388 |
IPR002885 | Pentatricopeptide_repeat | 141 | 184 |
IPR002885 | Pentatricopeptide_repeat | 443 | 490 |
IPR002885 | Pentatricopeptide_repeat | 39 | 87 |
No external refs found! |