Aliases : OTP84
Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 617.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g004356 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g36436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g37786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g38061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.04 | OrthoFinder output from all 47 species | |
Gb_00852 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02573 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
Gb_03691 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_14459 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_17295 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_17382 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_20153 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_21237 | REME1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26861 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_29878 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
Gb_33311 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
Gb_37254 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_41801 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g42280.1 | CRR21, LOC_Os01g42280 | RNA editing factor (CRR21) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10311934g0010 | MEF22 | Pentatricopeptide repeat-containing protein At1g15510,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10427342g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
MA_109134g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_11517g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_117650g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_11765g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_122606g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
MA_141034g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_205762g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_210089g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
MA_25584g0010 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_271639g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_28607g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_440697g0010 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
MA_5481g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_62181g0010 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_71420g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
MA_75255g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_805687g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_812716g0010 | EMB2758 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
MA_90090g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.05 | OrthoFinder output from all 47 species | |
MA_904305g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_9258g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g02390 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
Smo17005 | PDE247, CLB19 | Pentatricopeptide repeat-containing protein At2g17210... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29031 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g53369 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06449 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003284_P001 | Zm00001e003284 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015695_P001 | Zm00001e015695 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024311_P001 | Zm00001e024311 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035764_P001 | Zm00001e035764 | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 562 | 685 |
IPR002885 | Pentatricopeptide_repeat | 288 | 333 |
IPR002885 | Pentatricopeptide_repeat | 85 | 131 |
IPR002885 | Pentatricopeptide_repeat | 387 | 435 |
IPR002885 | Pentatricopeptide_repeat | 186 | 232 |
IPR002885 | Pentatricopeptide_repeat | 463 | 486 |
IPR002885 | Pentatricopeptide_repeat | 529 | 557 |
IPR002885 | Pentatricopeptide_repeat | 261 | 287 |
No external refs found! |