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Gb_37351


Description : WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana (sp|o22468|msi2_arath : 144.0)


Gene families : OG0004386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37351

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00164390 evm_27.TU.AmTr_v1... Histone-binding protein MSI1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001493.9 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g01327 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Mp4g21540.1 No alias Histone-binding protein MSI1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pir_g11707 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Solyc07g039200.4.1 Solyc07g039200 WD-40 repeat-containing protein MSI2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Tin_g10958 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Zm00001e027495_P001 Zm00001e027495 WD-40 repeat-containing protein MSI4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 354 391
IPR001680 WD40_repeat 268 301
IPR001680 WD40_repeat 309 345
IPR022052 Histone-bd_RBBP4_N 45 111
No external refs found!