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  5. Gb_36727

Gb_36727 (CID4)


Aliases : CID4

Description : Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana (sp|q94am9|cid4_arath : 264.0)


Gene families : OG0002546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36727
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT3G14010 CID4 CTC-interacting domain 4 0.03 OrthoFinder output from all 47 species
Adi_g022441 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02613 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04903 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07027.t1 CID3, Aspi01Gene07027 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33804.t1 CID3, Aspi01Gene33804 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008686 CID4 not classified & original description: CDS=246-2828 0.03 OrthoFinder output from all 47 species
Cba_g24223 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre01.g063997 CID4 Polyadenylate-binding protein-interacting protein 3... 0.02 OrthoFinder output from all 47 species
Dcu_g33488 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016786001 CID4 Polyadenylate-binding protein-interacting protein 3... 0.03 OrthoFinder output from all 47 species
MA_10437165g0010 CID4 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Solyc03g121950.3.1 CID4, Solyc03g121950 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Solyc06g062860.4.1 CID4, Solyc06g062860 Polyadenylate-binding protein-interacting protein 4... 0.04 OrthoFinder output from all 47 species
Zm00001e014564_P004 CID4, Zm00001e014564 Polyadenylate-binding protein-interacting protein 3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 251 319
IPR025852 SM_dom_ATX 89 175
No external refs found!