Gb_36602 (SAG15, CLPD, ERD1)

Aliases : SAG15, CLPD, ERD1

Description : chaperone component ClpD of chloroplast Clp-type protease complex

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_36602
Cluster	HCCA: Cluster_127

Target	Alias	Description	ECC score	Gene Family Method
Als_g63134	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01008635001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_21271	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.01	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.05	OrthoFinder output from all 47 species
Lfl_g02316	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10436005g0020	ATHSP101, HOT1, HSP101	Chaperone protein ClpB1 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_31115g0010	SAG15, CLPD, ERD1	chaperone component ClpD of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Mp5g14810.1	SAG15, CLPD, ERD1	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Msp_g12931	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Solyc03g117950.3.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
MF	GO:0016714	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	191	237
IPR004176	Clp_R_dom	111	159
IPR041546	ClpA/ClpB_AAA_lid	469	556
IPR003959	ATPase_AAA_core	326	447
IPR019489	Clp_ATPase_C	865	943
IPR003959	ATPase_AAA_core	683	858

External Links

No external refs found!