Aliases : OTP84
Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 701.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00268120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00010p00259620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g35030,... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00016p00115350 | RARE1,... | Pentatricopeptide repeat-containing protein At5g13270,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G28640 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G18840 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G39680 | EMB2744 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g004356 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g36436 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g37786 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g38061 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.36G051900.1 | Ceric.36G051900 | not classified & original description: pacid=50568048... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G053600.1 | Ceric.37G053600 | not classified & original description: pacid=50616731... | 0.04 | OrthoFinder output from all 47 species | |
Gb_08619 | No alias | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
Gb_27377 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | OrthoFinder output from all 47 species | |
Gb_37254 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_41801 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g11700.1 | MEF19, LOC_Os03g11700 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g57940.1 | CRR22, LOC_Os04g57940 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.04 | OrthoFinder output from all 47 species | |
MA_102449g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_10277392g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
MA_10311934g0010 | MEF22 | Pentatricopeptide repeat-containing protein At1g15510,... | 0.05 | OrthoFinder output from all 47 species | |
MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10435641g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
MA_108139g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_1109g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_112849g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
MA_11517g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_117650g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_11765g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_118886g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
MA_124907g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_131437g0010 | No alias | RNA editing factor (MEF3) | 0.05 | OrthoFinder output from all 47 species | |
MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_14381g0010 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
MA_210089g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_25515g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_271639g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_28607g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_30632g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_322292g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_32723g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_3317g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_3471g0010 | OTP84 | RNA editing factor (MEF19) | 0.03 | OrthoFinder output from all 47 species | |
MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
MA_472579g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_5481g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_6511g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
MA_6527g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_656915g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_66417g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
MA_684240g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_68933g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_835083g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_83898g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_8491g0010 | CRR2 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_90090g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g02390 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g13293 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g37271 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0106.g020215 | No alias | not classified & original description: CDS=1-5316 | 0.04 | OrthoFinder output from all 47 species | |
Smo17005 | PDE247, CLB19 | Pentatricopeptide repeat-containing protein At2g17210... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g09049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29031 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003284_P001 | Zm00001e003284 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007597_P001 | Zm00001e007597 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010182_P001 | Zm00001e010182 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 396 | 418 |
IPR002885 | Pentatricopeptide_repeat | 699 | 722 |
IPR032867 | DYW_dom | 797 | 921 |
IPR002885 | Pentatricopeptide_repeat | 623 | 671 |
IPR002885 | Pentatricopeptide_repeat | 118 | 166 |
IPR002885 | Pentatricopeptide_repeat | 522 | 570 |
IPR002885 | Pentatricopeptide_repeat | 220 | 267 |
IPR002885 | Pentatricopeptide_repeat | 422 | 467 |
IPR002885 | Pentatricopeptide_repeat | 320 | 367 |
No external refs found! |