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  5. Gb_36435

Gb_36435


Description : Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana (sp|q9lw63|pp251_arath : 635.0)


Gene families : OG0011736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011736_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36435

Target Alias Description ECC score Gene Family Method Actions
Adi_g026205 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052380 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30715.t1 Aspi01Gene30715 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34608.t1 Aspi01Gene34608 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_25843 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.08 OrthoFinder output from all 47 species
MA_12187g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo80847 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 653 777
IPR002885 Pentatricopeptide_repeat 378 426
IPR002885 Pentatricopeptide_repeat 480 526
IPR002885 Pentatricopeptide_repeat 243 289
IPR002885 Pentatricopeptide_repeat 142 189
IPR002885 Pentatricopeptide_repeat 346 374
IPR002885 Pentatricopeptide_repeat 51 72
IPR002885 Pentatricopeptide_repeat 318 345
No external refs found!