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  5. Mp3g17350.1

Mp3g17350.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g17350.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00127480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00110p00030150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
Gb_06182 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_07156 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
Gb_09709 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
MA_167128g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c17_21890V3.1 No alias phytochrome interacting factor 3 0.02 Archaeplastida
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.02 Archaeplastida
Smo404767 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AMTR_s00106p00127480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AMTR_s00110p00030150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 LandPlants
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.02 LandPlants
Gb_09709 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.03 LandPlants
Pp3c17_21890V3.1 No alias phytochrome interacting factor 3 0.02 LandPlants
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.02 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 537 583
No external refs found!