Aliases : TIC55-IV, ACD1-LIKE, PTC52
Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 197.0)
Gene families : OG0000770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000770_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_35364 | |
Cluster | HCCA: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g17431 | TIC55-IV,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37186 | TIC55-IV,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g78585 | TIC55-IV,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cre06.g305650 | ACD1, PAO, LLS1 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre17.g724600 | ACD1, PAO, LLS1 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre17.g724700 | ACD1, PAO, LLS1 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025437001 | TIC55-IV,... | No description available | 0.04 | OrthoFinder output from all 47 species | |
Gb_37383 | ACD1, PAO, LLS1 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Gb_37385 | ACD1, PAO, LLS1 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Mp3g10850.1 | ACD1, PAO, LLS1 | pheophorbide a oxygenase (PAO) | 0.03 | OrthoFinder output from all 47 species | |
Smo174928 | ACD1, PAO, LLS1 | Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g039870.3.1 | TIC55-IV,... | Protochlorophyllide-dependent translocon component 52,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g040160.4.1 | TIC55-IV,... | Protochlorophyllide-dependent translocon component 52,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000376_P001 | ACD1, PAO, LLS1,... | pheophorbide a oxygenase (PAO) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0015711 | organic anion transport | IEP | HCCA |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
BP | GO:0015743 | malate transport | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
CC | GO:0048046 | apoplast | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013626 | PaO | 148 | 242 |
No external refs found! |