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  5. Gb_35274

Gb_35274 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35274
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Adi_g054848 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Als_g19974 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g26657 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69357.t1 BAT1, Aspi01Gene69357 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G079000.1 BAT1, Ceric.12G079000 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g15079 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g19757 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008812001 BAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01022329001 BAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g42234.1 BAT1, LOC_Os01g42234 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Len_g18023 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11840 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_10426763g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
MA_58237g0020 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g15510.1 BAT1 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g13339 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Smo439119 BAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Spa_g41618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15359 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.05 OrthoFinder output from all 47 species
Zm00001e018679_P001 BAT1, Zm00001e018679 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!