LOC_Os03g11120 (Os03g0209600)


Aliases : Os03g0209600

Description : 29.1.10 protein.aa activation.methionine-tRNA ligase OVULE ABORTION 1 (OVA1)


Gene families : OG_01_0003730 (Gene family) Phylogenetic Tree(s): OG0003730_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g11120
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G55400 OVA1 methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.04 Gene family
Cpa|evm.model.tig00000607.15 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.02 Gene family
Cpa|evm.model.tig00020675.1 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.04 Gene family
Cre12.g487100 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.07 Gene family
GSVIVT01016575001 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.13 Gene family
MA_10432167g0010 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.04 Gene family
MA_10434323g0010 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.04 Gene family
MA_4265275g0010 No alias No description available 0.02 Gene family
MA_776900g0010 No alias 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.07 Gene family
Smo154280 PACid_15401882 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.08 Gene family
Solyc05g054600.3.1 Solyc05g054600.3 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.11 Gene family
Zm00001d028038 GRMZM2G029055 29.1.10 protein.aa activation.methionine-tRNA ligase... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 195 422
IPR002300 aa-tRNA-synth_Ia 60 181
No external refs found!