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  5. Gb_35127

Gb_35127


Description : Protein OBERON 4 OS=Arabidopsis thaliana (sp|q84ti3|obe4_arath : 503.0)


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35127

Target Alias Description ECC score Gene Family Method Actions
AT1G14740 No alias Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
AT3G63500 No alias Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
Adi_g011974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g077978 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Adi_g098683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112659 OBE1 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aev_g04884 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aob_g27012 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Cba_g20827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77484 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06398 OBE2 transcriptional co-regulator *(Oberon) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g22990 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03782 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27694 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01032137001 No alias Protein OBERON 4 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
MA_214119g0010 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_8062g0010 No alias no description available(sp|q10pc5|tta1_orysj : 115.0) 0.03 OrthoFinder output from all 47 species
Ore_g05055 OBE2 transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Ore_g10796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16666 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g27832 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g08472 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013014 OBE1 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013343 OBE2 A1-class (Pepsin) protease & original description: CDS=401-2110 0.03 OrthoFinder output from all 47 species
Sam_g07945 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Spa_g46295 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Tin_g11564 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032535 Oberon_cc 1228 1355
IPR032881 Oberon_PHD 1009 1133
No external refs found!