Description : associated component HDC1/Rxt3 of histone deacetylase machineries
Gene families : OG0004198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004198_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g19270 | No alias | associated component *(HDC1) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene47293.t1 | Aspi01Gene47293 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z065200.1 | Ceric.1Z065200 | associated component *(HDC1) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g03126 | No alias | associated component *(HDC1) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07857 | No alias | associated component *(HDC1) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000253001 | No alias | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06630 | No alias | associated component *(HDC1) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g13819 | No alias | associated component *(HDC1) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010714_P003 | Zm00001e010714 | associated component HDC1/Rxt3 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016575 | histone deacetylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043248 | proteasome assembly | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013951 | Rxt3 | 31 | 74 |
No external refs found! |