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  5. Gb_34677

Gb_34677


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 108.0)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50190 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G60470 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Adi_g074334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001131001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_19196 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37280 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_41229 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g12279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10333153g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10428428g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_120599g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_19476g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_6919317g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g49318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g008900.4.1 Solyc04g008900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e041187_P001 Zm00001e041187 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 21 472
No external refs found!