1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_34642

Gb_34642 (PNH, AGO10, ZLL)


Aliases : PNH, AGO10, ZLL

Description : RIS-Complex miRNA recruiting factor (AGO1)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34642

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AT1G69440 AGO7, ZIP Argonaute family protein 0.04 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.03 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene47903.t1 AGO1, Aspi01Gene47903 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G056900.1 AGO1, Ceric.28G056900 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Sam_g33046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069270.2.1 AGO2, Solyc02g069270 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
Solyc06g072300.4.1 AGO1, Solyc06g072300 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003165 Piwi 692 1011
IPR014811 ArgoL1 330 379
IPR003100 PAZ_dom 385 532
IPR032472 ArgoL2 543 589
IPR032473 Argonaute_Mid_dom 600 678
IPR032474 Argonaute_N 155 320
No external refs found!