LOC_Os03g10510 (Os03g0202200)


Aliases : Os03g0202200

Description : 34.20 transport.porins Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. voltage dependent anion channel 2 (VDAC2)


Gene families : OG_01_0000402 (Gene family) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g10510
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT3G01280 ATVDAC1, VDAC1 voltage dependent anion channel 1 0.04 Gene family
AT5G15090 ATVDAC3, VDAC3 voltage dependent anion channel 3 0.06 Gene family
AT5G67500 VDAC2, ATVDAC2 voltage dependent anion channel 2 0.03 Gene family
Cpa|evm.model.tig00000829.10 No alias 34.20 transport.porins Encodes a voltage-dependent anion... 0.08 Gene family
Cre01.g013700 No alias 34.18 transport.unspecified anions Encodes a... 0.01 Gene family
Cre05.g241950 No alias 34.18 transport.unspecified anions Encodes a... 0.01 Gene family
GSVIVT01000122001 No alias 34.20 transport.porins Encodes a voltage-dependent anion... 0.01 Gene family
GSVIVT01020070001 No alias 34.20 transport.porins Encodes a voltage-dependent anion... 0.04 Gene family
MA_10427919g0010 No alias 34.20 transport.porins Encodes a voltage-dependent anion... 0.01 Gene family
MA_635089g0010 No alias 34.20 transport.porins Encodes a voltage-dependent anion... 0.03 Gene family
Smo143103 PACid_15413197 No description available 0.07 Gene family
Solyc02g067460.3.1 Solyc02g067460.3 34.20 transport.porins Encodes a voltage-dependent anion... 0.06 Gene family
Solyc02g092440.3.1 Solyc02g092440.3 34.20 transport.porins Encodes a voltage-dependent anion... 0.07 Gene family
Solyc03g058920.3.1 Solyc03g058920.3 34.20 transport.porins Encodes a voltage-dependent anion... 0.02 Gene family
Zm00001d020219 GRMZM2G146670 34.20 transport.porins Encodes a voltage-dependent anion... 0.06 Gene family
Zm00001d028102 GRMZM2G055025 34.20 transport.porins Encodes a voltage-dependent anion... 0.03 Gene family
Zm00001d038840 GRMZM2G115049 34.20 transport.porins Encodes a voltage-dependent anion... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 6 270
No external refs found!