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  5. Gb_34275

Gb_34275


Description : rRNA adenosine dimethylase (DIM1A)


Gene families : OG0002989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34275

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00156590 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037207 No alias rRNA adenosine dimethylase *(DIM1A) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G044700.1 Ceric.35G044700 rRNA adenosine dimethylase *(DIM1A) & original... 0.04 OrthoFinder output from all 47 species
Cre01.g042900 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
MA_10429808g0010 No alias Ribosomal RNA small subunit methyltransferase... 0.1 OrthoFinder output from all 47 species
Mp6g10100.1 No alias rRNA adenosine dimethylase (DIM1A) 0.03 OrthoFinder output from all 47 species
Sam_g16982 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100430.3.1 Solyc01g100430 rRNA adenosine dimethylase (DIM1A) 0.06 OrthoFinder output from all 47 species
Tin_g06535 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013790_P001 Zm00001e013790 rRNA adenosine dimethylase (DIM1A) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 30 272
No external refs found!