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  5. Gb_34228

Gb_34228


Description : Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana (sp|q9liq7|pp252_arath : 657.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34228

Target Alias Description ECC score Gene Family Method Actions
Als_g05108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04687 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G069100.1 CRR22, Ceric.13G069100 not classified & original description: pacid=50635982... 0.02 OrthoFinder output from all 47 species
Dcu_g05769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21216 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26848 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26851 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18932 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24183 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22460 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61912 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000052 EMB2758 not classified & original description: CDS=1-1683 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019259 No alias not classified & original description: CDS=1-1518 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023237 No alias not classified & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g26236 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 555 678
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 383 430
IPR002885 Pentatricopeptide_repeat 457 480
IPR002885 Pentatricopeptide_repeat 528 551
IPR002885 Pentatricopeptide_repeat 149 177
No external refs found!