1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_34217

Gb_34217


Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana (sp|q9lig0|y3136_arath : 98.6)


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00128800 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00129830 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00130010 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00131570 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.07 OrthoFinder output from all 47 species
AMTR_s00071p00133060 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.09 OrthoFinder output from all 47 species
AMTR_s00071p00149400 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Aev_g18685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21751.t1 Aspi01Gene21751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G003700.1 Ceric.20G003700 not classified & original description: pacid=50567318... 0.02 OrthoFinder output from all 47 species
Dcu_g13293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011970001 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_08596 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.1 OrthoFinder output from all 47 species
Gb_16262 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
LOC_Os08g29510.1 LOC_Os08g29510 Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Lfl_g17492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425962g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_10427711g0010 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_10431045g0030 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
MA_10431045g0040 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_20531g0020 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_220550g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_498632g0010 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_5902472g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_796805g0010 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.09 OrthoFinder output from all 47 species
MA_938243g0010 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo425605 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Smo439273 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Smo74242 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Solyc05g009960.4.1 Solyc05g009960 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Spa_g47697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016597_P001 Zm00001e016597 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 146 208
No external refs found!