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Gb_33747 (emb1796)


Aliases : emb1796

Description : Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana (sp|q9m3a8|pp273_arath : 266.0)


Gene families : OG0010708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33747

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00236970 emb1796,... Pentatricopeptide repeat-containing protein At3g49240,... 0.03 OrthoFinder output from all 47 species
AT3G49240 emb1796 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
LOC_Os11g24570.1 emb1796, LOC_Os11g24570 Pentatricopeptide repeat-containing protein At3g49240,... 0.02 OrthoFinder output from all 47 species
MA_118904g0010 emb1796 Pentatricopeptide repeat-containing protein At1g10270... 0.04 OrthoFinder output from all 47 species
MA_9161715g0010 emb1796 Pentatricopeptide repeat-containing protein At1g10270... 0.04 OrthoFinder output from all 47 species
Solyc03g083280.4.1 emb1796, Solyc03g083280 Pentatricopeptide repeat-containing protein At3g49240,... 0.06 OrthoFinder output from all 47 species
Zm00001e004732_P001 GRP23, Zm00001e004732 Pentatricopeptide repeat-containing protein At1g10270... 0.03 OrthoFinder output from all 47 species
Zm00001e020614_P001 emb1796, Zm00001e020614 Pentatricopeptide repeat-containing protein At3g49240,... 0.07 OrthoFinder output from all 47 species
Zm00001e032163_P001 emb1796, Zm00001e032163 Pentatricopeptide repeat-containing protein At3g49240,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 129 155
IPR002885 Pentatricopeptide_repeat 235 263
IPR002885 Pentatricopeptide_repeat 332 364
IPR002885 Pentatricopeptide_repeat 267 315
IPR002885 Pentatricopeptide_repeat 441 489
IPR002885 Pentatricopeptide_repeat 371 420
IPR002885 Pentatricopeptide_repeat 161 208
No external refs found!