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  5. Gb_33593

Gb_33593 (OSU1, QUA2, TSD2)


Aliases : OSU1, QUA2, TSD2

Description : Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana (sp|q9c9q8|pmtt_arath : 523.0)


Gene families : OG0002602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33593

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00151520 QUL2,... Probable methyltransferase PMT5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G13860 QUL1 QUASIMODO2 LIKE 1 0.02 OrthoFinder output from all 47 species
AT2G03480 QUL2 QUASIMODO2 LIKE 2 0.02 OrthoFinder output from all 47 species
Aev_g06693 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.06 OrthoFinder output from all 47 species
Ala_g06252 QUL1 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Als_g07467 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.06 OrthoFinder output from all 47 species
Als_g40211 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Aop_g29423 QUL2 pectin methyltransferase *(QUA2) involved in... 0.05 OrthoFinder output from all 47 species
Cba_g12714 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Cba_g14166 QUL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21888 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ceric.18G036700.1 OSU1, QUA2,... pectin methyltransferase *(QUA2) involved in... 0.06 OrthoFinder output from all 47 species
Dac_g07135 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Dac_g21143 QUL1 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Dcu_g01897 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Dde_g09841 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ehy_g06931 OSU1, QUA2, TSD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08663 OSU1, QUA2, TSD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21116 OSU1, QUA2, TSD2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012188001 QUL2 Probable methyltransferase PMT5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g51860.1 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Len_g03898 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Lfl_g08037 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Lfl_g09766 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Mp7g08350.1 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g35335 QUL1 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Ore_g17492 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ore_g40542 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ppi_g52487 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Sam_g03875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25099 No alias pectin methyltransferase *(QUA2) involved in... 0.05 OrthoFinder output from all 47 species
Sam_g38902 No alias pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Smo426562 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc04g005430.4.1 QUL2, Solyc04g005430 Probable methyltransferase PMT4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g074290.3.1 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07107 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Spa_g16410 QUL2 pectin methyltransferase *(QUA2) involved in... 0.06 OrthoFinder output from all 47 species
Spa_g16855 OSU1, QUA2, TSD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g35017 OSU1, QUA2, TSD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14269 OSU1, QUA2, TSD2 pecTin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Zm00001e023857_P001 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 1 293
IPR004159 Put_SAM_MeTrfase 325 416
No external refs found!