Gb_33548 (RAD5)

Aliases : RAD5

Description : chromatin remodeling factor (Rad5)

Gene families : OG0010011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010011_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_33548
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00020800.32	No alias	Putative SWI/SNF-related matrix-associated...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021293.6	RAD5	DNA repair protein RAD5A OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	423	752
IPR001650	Helicase_C	917	1027

External Links

No external refs found!