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  5. Gb_33498

Gb_33498


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 205.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33498

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g054356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16121 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69083 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05748.t1 Aspi01Gene05748 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30209.t1 Aspi01Gene30209 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36632.t1 Aspi01Gene36632 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38685.t1 Aspi01Gene38685 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.07 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.03 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.02 OrthoFinder output from all 47 species
Dac_g07418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36315 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009612001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_33493 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g28919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36542 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_28858g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Mp7g17880.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g19836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.04 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g044320.2.1 Solyc12g044320 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06919 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e015781_P001 Zm00001e015781 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 104 133
IPR001680 WD40_repeat 139 174
IPR001680 WD40_repeat 188 220
No external refs found!