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Gb_33357


Description : Pentatricopeptide repeat-containing protein At2g40240, mitochondrial OS=Arabidopsis thaliana (sp|q9s733|pp196_arath : 167.0)


Gene families : OG0008339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00103370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39710... 0.03 OrthoFinder output from all 47 species
AMTR_s00144p00054940 EMB2453, ATPPR5,... Pentatricopeptide repeat-containing protein At2g40240,... 0.05 OrthoFinder output from all 47 species
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.03 OrthoFinder output from all 47 species
MA_863891g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g17150.1 No alias Pentatricopeptide repeat-containing protein At1g51965,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 428 453
IPR002885 Pentatricopeptide_repeat 250 278
IPR002885 Pentatricopeptide_repeat 390 409
IPR002885 Pentatricopeptide_repeat 291 313
IPR002885 Pentatricopeptide_repeat 315 365
No external refs found!