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  5. Gb_33346

Gb_33346


Description : RNA polymerase-IV-positioning factor (SHH). transcription factor (SAWADEE)


Gene families : OG0001794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33346

Target Alias Description ECC score Gene Family Method Actions
Als_g01529 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Aob_g07141 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z192200.1 Ceric.1Z192200 RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Dac_g01386 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Dac_g18127 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17571 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012111 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 118 247
No external refs found!