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Description : no hits & (original description: none)
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_33334 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G02840 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077173 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16119 | PUB25 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19134 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene19337.t2 | PUB26, Aspi01Gene19337 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44809.t1 | PUB25, Aspi01Gene44809 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene51624.t1 | PUB15, Aspi01Gene51624 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene55033.t1 | PUB25, Aspi01Gene55033 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene60604.t1 | PUB26, Aspi01Gene60604 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67880.t1 | PUB26, Aspi01Gene67880 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g46168 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02627 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_02635 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_16227 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16228 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g34030.1 | PUB23, LOC_Os04g34030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31416 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10425865g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_95662g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_95906g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g11730.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g11000.1 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g09512 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c22_7680V3.1 | Pp3c22_7680 | CYS, MET, PRO, and GLY protein 2 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_4891V3.1 | PUB29, ATPUB29,... | plant U-box 26 | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002598_P001 | Zm00001e002598 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038657_P001 | Zm00001e038657 | U-box domain-containing protein 75 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |