LOC_Os03g08460 (Os03g0182800)


Aliases : Os03g0182800

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g08460
Cluster HCCA cluster: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.04 Gene family
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.02 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.04 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.01 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.02 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01013924001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01021146001 No alias No description available 0.04 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01027770001 No alias No description available 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.04 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.02 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.04 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.03 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10433094g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_132427g0010 No alias No description available 0.03 Gene family
MA_2040g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_24801g0010 No alias No description available 0.02 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_9905g0010 No alias No description available 0.02 Gene family
MA_99821g0010 No alias No description available 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.03 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.02 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.02 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.03 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.02 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc11g012980.1.1 Solyc11g012980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.01 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.02 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d009103 GRMZM2G053503 No description available 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.04 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d017480 GRMZM5G816314 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019096 GRMZM2G379652 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d019475 No alias No description available 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.05 Gene family
Zm00001d022461 GRMZM2G025062 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.02 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.07 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031501 GRMZM2G033656 No description available 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d039019 GRMZM2G317596 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.04 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.04 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.02 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 120 170
No external refs found!