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Gb_32774 (CAF2, ATCAF2)


Aliases : CAF2, ATCAF2

Description : CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lda9|caf2p_arath : 190.0)


Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Gb_32774

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00043140 ATCAF1, CAF1,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT2G20020 ATCAF1, CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.08 OrthoFinder output from all 47 species
Cba_g06914 CAF2, ATCAF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013770001 CAF2, ATCAF2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01015331001 ATCAF1, CAF1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21990.1 CAF2, ATCAF2,... component CAF of CRS2-CAF plastidial RNA splicing factor... 0.05 OrthoFinder output from all 47 species
LOC_Os08g07790.1 LOC_Os08g07790 mCSF mitochondrial RNA splicing factor 0.04 OrthoFinder output from all 47 species
MA_75293g0010 CAF2, ATCAF2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g29789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26827 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species
Solyc11g066300.3.1 CAF2, ATCAF2,... component CAF of CRS2-CAF plastidial RNA splicing factor... 0.04 OrthoFinder output from all 47 species
Spa_g31214 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006353 DNA-templated transcription termination IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 21 104
No external refs found!