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  5. Gb_32672

Gb_32672 (PARL1, ATNUC-L1, NUC-L1)


Aliases : PARL1, ATNUC-L1, NUC-L1

Description : rDNA chromatin transcription factor (NCL)


Gene families : OG0001950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32672

Target Alias Description ECC score Gene Family Method Actions
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.1 OrthoFinder output from all 47 species
Aev_g13012 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Aop_g12627 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Aop_g39120 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Ceric.05G016700.1 PARLL1, NUC-L2,... regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ceric.15G060200.1 PARL1, ATNUC-L1,... regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Cre06.g275100 PARLL1, NUC-L2, ATNUC-L2 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 OrthoFinder output from all 47 species
Dcu_g32133 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
GSVIVT01012042001 PARLL1, NUC-L2, ATNUC-L2 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.1 OrthoFinder output from all 47 species
LOC_Os04g52960.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.06 OrthoFinder output from all 47 species
LOC_Os08g09350.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.11 OrthoFinder output from all 47 species
MA_11380g0030 PARLL1, NUC-L2, ATNUC-L2 rDNA chromatin transcription factor (NCL) 0.06 OrthoFinder output from all 47 species
Mp1g21390.1 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.08 OrthoFinder output from all 47 species
Nbi_g06940 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Nbi_g25668 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Ppi_g01925 CID13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15345 No alias regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Smo234317 PARL1, ATNUC-L1, NUC-L1 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 OrthoFinder output from all 47 species
Solyc02g014310.4.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.06 OrthoFinder output from all 47 species
Spa_g57117 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.08 OrthoFinder output from all 47 species
Tin_g09738 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Zm00001e004617_P003 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.04 OrthoFinder output from all 47 species
Zm00001e021609_P004 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 506 562
IPR000504 RRM_dom 698 769
No external refs found!