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  5. Gb_31963

Gb_31963


Description : actin stability factor (PMI1/PMI15). actin stability co-factor (PMIR)


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31963

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00107090 PMI1,... Cytoskeleton.cp-actin-dependent plastid... 0.05 OrthoFinder output from all 47 species
Adi_g058455 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20246 No alias actin stability co-factor *(PMIR) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g22592 No alias actin stability co-factor *(PMIR) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g08736 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46917.t1 Aspi01Gene46917 actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009511 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034625 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.28G020700.1 PMI1, Ceric.28G020700 actin stability factor *(PMI1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G018400.1 PMI1, Ceric.32G018400 actin stability co-factor *(PMIR) & original... 0.08 OrthoFinder output from all 47 species
Ceric.35G017200.1 Ceric.35G017200 actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g03420 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12279 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16960 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04049 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013417001 PMI1 Cytoskeleton.cp-actin-dependent plastid... 0.08 OrthoFinder output from all 47 species
Lfl_g17701 PMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19859 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22563 No alias actin stability co-factor *(PMIR) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10117 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53032 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Smo444108 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.04 OrthoFinder output from all 47 species
Spa_g30544 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28063 No alias acTin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002231_P001 PMI1, Zm00001e002231 actin stability factor (PMI1/PMI15) 0.04 OrthoFinder output from all 47 species
Zm00001e034908_P002 PMI1, Zm00001e034908 actin stability factor (PMI1/PMI15) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 202 344
No external refs found!