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  5. Gb_31528

Gb_31528


Description : GTPase effector (BDR)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31528
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00188960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11021 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18965 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21827 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G036700.1 Ceric.33G036700 GTPase effector *(BDR) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g41584 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g55795.1 LOC_Os01g55795 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os07g40150.1 LOC_Os07g40150 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os10g27120.1 LOC_Os10g27120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g19621 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19310 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37614 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 121 363
No external refs found!