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  5. Gb_31525

Gb_31525


Description : NUFIP snoRNP rRNA methylation complex assembly factor


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31525

Target Alias Description ECC score Gene Family Method Actions
AT5G18440 No alias CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental... 0.05 OrthoFinder output from all 47 species
Adi_g082531 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Als_g30603 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Aob_g11786 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.05 OrthoFinder output from all 47 species
Aop_g08132 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Ceric.30G030300.1 Ceric.30G030300 not classified & original description: pacid=50608069... 0.06 OrthoFinder output from all 47 species
Ehy_g24829 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.05 OrthoFinder output from all 47 species
Lfl_g27692 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
MA_10431482g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.05 OrthoFinder output from all 47 species
MA_30455g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species
Pnu_g23882 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.05 OrthoFinder output from all 47 species
Ppi_g41951 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Solyc01g096920.3.1 Solyc01g096920 NUFIP snoRNP rRNA methylation complex assembly factor 0.04 OrthoFinder output from all 47 species
Spa_g15180 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Zm00001e019484_P003 Zm00001e019484 NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019496 NUFIP1_cons_dom 590 616
No external refs found!